STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98413.1KEGG: npu:Npun_R1064 2.8e-156 glycosyl transferase, group 1. (735 aa)    
Predicted Functional Partners:
EKE98414.1
Hypothetical protein; KEGG: eli:ELI_06605 0.052 NADH-quinone oxidoreductase chain M; K00342 NADH dehydrogenase I subunit M; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.885
EKE98603.1
NHL repeat protein; KEGG: rop:ROP_41930 0.0026 serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.686
EKF00334.1
KEGG: ava:Ava_5045 6.2e-104 glycosyl transferase, group 1 K00703; Psort location: Cytoplasmic, score: 8.96.
  
     0.675
EKF04880.1
KEGG: syg:sync_0223 6.2e-33 glycosyl transferase, group 1 K01043.
  
     0.606
EKF03591.1
KEGG: npu:Npun_F5500 6.7e-130 glycosyl transferase, group 1; Psort location: Cytoplasmic, score: 8.96.
  
     0.590
EKF06094.1
KEGG: npu:Npun_F5705 4.4e-284 malto-oligosyltrehalose trehalohydrolase K01236; Psort location: Cytoplasmic, score: 9.97.
   
  0.558
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.558
EKE96928.1
KEGG: npu:Npun_R1027 1.3e-282 alpha amylase, catalytic region K00700; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 13 family.
   
  0.558
EKE96934.1
KEGG: npu:Npun_F0258 2.8e-234 alpha amylase, catalytic region; Psort location: Cytoplasmic, score: 9.97.
   
  0.558
EKE98412.1
Glycosyltransferase, group 2 family protein; KEGG: lbi:LEPBI_I1997 1.0e-17 putative glycosyltransferase.
 
  
 0.546
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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