STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98363.1Peptidase, M23 family; KEGG: npu:Npun_F4149 3.3e-128 peptidase M23B. (311 aa)    
Predicted Functional Partners:
EKE99377.1
Peptidase, M23 family; KEGG: psp:PSPPH_0687 6.2e-10 M24/M37 family peptidase.
  
     0.738
EKE97480.1
KEGG: npu:Npun_F3870 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.659
EKF05834.1
KEGG: npu:Npun_F3055 6.9e-295 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.658
EKE99867.1
Transglycosylase; KEGG: npu:Npun_R0887 0. FHA modulated glycosyl transferase/transpeptidase; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.635
EKF00372.1
KEGG: npu:Npun_R4647 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.604
EKE98364.1
Hypothetical protein; KEGG: eat:EAT1b_2647 0.22 valyl-tRNA synthetase; K01873 valyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
       0.589
EKE98362.1
AEC familymalonate efflux carrier protein; KEGG: azo:azo2550 6.7e-05 mdcF3; putative malonate transporter K07088; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.472
EKF05230.1
KEGG: ava:Ava_3135 2.2e-99 hypothetical protein.
  
     0.421
EKE97579.1
Putative lipid-A-disaccharide; KEGG: ana:alr4005 1.3e-176 hypothetical protein; K00748 lipid-A-disaccharide synthase.
 
     0.414
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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