STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE98385.1Aminotransferase, class III; KEGG: bbt:BBta_1045 2.1e-149 glutamate-1-semialdehyde 2,1-aminomutase K01845; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)    
Predicted Functional Partners:
EKF01035.1
Porphobilinogen synthase; KEGG: ana:all4725 3.7e-138 delta-aminolevulinic acid dehydratase K01698; Psort location: Cytoplasmic, score: 8.96; Belongs to the ALAD family.
 
 
 0.953
EKF04981.1
Porphobilinogen synthase; KEGG: ava:Ava_3297 5.4e-160 delta-aminolevulinic acid dehydratase K01698; Belongs to the ALAD family.
 
 
 0.952
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.927
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
  
 0.922
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
 
 0.911
EKE99922.1
Non-ribosomal peptide synthetase; KEGG: npu:Npun_R3431 0. amino acid adenylation domain-containing protein; Psort location: CytoplasmicMembrane, score: 8.46.
   
0.877
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.863
EKF03198.1
KEGG: eta:ETA_13580 4.0e-109 8-amino-7-oxononanoate synthase K00639; Psort location: Cytoplasmic, score: 8.96.
   
 0.861
EKF04926.1
KEGG: npu:Npun_R1866 2.5e-219 uroporphyrin-III C-methyltransferase; K01719 uroporphyrinogen-III synthase K02303; Belongs to the precorrin methyltransferase family.
 
 
 0.851
EKF04555.1
AMP-binding enzyme; KEGG: ava:Ava_C0009 0. amino acid adenylation; Psort location: CytoplasmicMembrane, score: 8.46.
 
 0.839
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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