STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98154.1Hypothetical protein; KEGG: mge:MG_042 0.28 potA; spermidine/putrescine ABC transporter, ATP-binding protein, putative; K11072 spermidine/putrescine transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96. (485 aa)    
Predicted Functional Partners:
EKE98155.1
Hypothetical protein; KEGG: ecz:ECS88_4757 0.57 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791.
       0.559
EKE98156.1
ICE-like protease p20 domain protein; KEGG: scl:sce4551 1.2e-78 protein kinase.
       0.413
EKE98157.1
WD domain, G-beta repeat protein; KEGG: scl:sce4552 7.1e-119 protein kinase; Psort location: Extracellular, score: 9.64.
       0.413
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.