STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98161.1Hypothetical protein; KEGG: ara:Arad_8795 0.9995 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase; K00097 4-hydroxythreonine-4-phosphate dehydrogenase. (42 aa)    
Predicted Functional Partners:
EKE98160.1
Chloramphenicol phosphotransferase-like protein; KEGG: rsa:RSal33209_3240 0.055 alpha-ribazole-5'-phosphate phosphatase K01834.
       0.689
EKE98162.1
Acetyltransferase, GNAT family; KEGG: mse:Msed_0145 1.2e-06 SSU ribosomal protein S18P alanine acetyltransferase K03789.
       0.440
EKE98159.1
Hypothetical protein; KEGG: bha:BH0109 0.64 gltX; glutamyl-tRNA synthetase K09698.
       0.436
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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