STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98234.1Putative PadR family transcriptional regulator; KEGG: tsi:TSIB_0898 0.0082 putative threonine synthase K01733. (118 aa)    
Predicted Functional Partners:
EKE98235.1
Hypothetical protein; KEGG: nve:NEMVE_v1g160496 0.47 hypothetical protein; K10661 E3 ubiquitin-protein ligase MARCH6; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EKF04474.1
CAAX amino terminal protease family protein; KEGG: gfo:GFO_0014 0.017 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.446
EKE98236.1
Hypothetical protein; KEGG: pfo:Pfl01_0113 0.20 NAD/NADP transhydrogenase, membrane-spanning dIIa subunit; K00324 NAD(P) transhydrogenase subunit alpha.
       0.429
EKF04475.1
Putative abortive infection protein; KEGG: gfo:GFO_0014 1.0e-05 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.428
EKE98233.1
Hypothetical protein; KEGG: krh:KRH_15770 0.87 putative ATP-dependent DNA helicase K03722.
       0.417
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.