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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE98092.1Hypothetical protein; KEGG: mae:Maeo_0052 0.066 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96. (470 aa)    
Predicted Functional Partners:
EKE98093.1
KEGG: cbr:CBG19678 0.97 Hypothetical protein CBG19678; K11428 histone-lysine N-methyltransferase SETD8.
       0.697
EKE98094.1
Hypothetical protein; KEGG: bta:513986 0.0025 MTMR7; myotubularin related protein 7.
       0.697
EKE98095.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 2.9e-62 TPR repeat-containing serine/threonin protein kinase K00908.
       0.683
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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