STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98290.1Hypothetical protein; KEGG: edi:EDI_191950 0.96 NMDA receptor-regulated protein. (318 aa)    
Predicted Functional Partners:
EKE98289.1
Transposase; KEGG: xca:xccb100_1123 0.20 clpB; ATP-dependent Clp protease K03695; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.983
EKE98287.1
Putative transposase; KEGG: pat:Patl_1134 0.90 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798.
 
   
 0.958
EKE98288.1
Putative integrase; KEGG: gga:417296 0.96 MAN1B1; mannosidase, alpha, class 1B, member 1; K01230 mannosyl-oligosaccharide alpha-1,2-mannosidase; overlaps another CDS with the same product name.
 
     0.946
EKE97259.1
Transposition protein; KEGG: spl:Spea_2419 0.27 exodeoxyribonuclease V, gamma subunit; K03583 exodeoxyribonuclease V gamma subunit; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.928
EKE97260.1
Transposase; KEGG: cac:CAC1499 0.67 A/G-specific DNA glycosylase; K03575 A/G-specific adenine glycosylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.776
EKE97094.1
Hypothetical protein; KEGG: tpe:Tpen_0304 0.00015 AAA family ATPase, CDC48 subfamily protein K06027; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.629
EKF04001.1
Putative integrase; KEGG: dme:Dmel_CG17927 0.026 Mhc; Myosin heavy chain K10352; Psort location: Cytoplasmic, score: 8.96.
 
     0.613
EKE97115.1
Hypothetical protein; KEGG: tdn:Suden_0858 0.80 polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase.
   
   0.569
EKE97287.1
Type II secretion system protein; KEGG: bcy:Bcer98_2406 0.0019 ABC transporter-related protein; K02013 iron complex transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.536
EKF06202.1
Hypothetical protein; KEGG: sca:Sca_0957 0.87 glnA; glutamine synthetase K01915; Psort location: Cytoplasmic, score: 8.96.
  
     0.498
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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