STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97878.1PRTRC system ThiF family protein; KEGG: pfd:PFDG_00868 8.8e-07 hypothetical protein; K10686 ubiquitin-activating enzyme E1 C. (285 aa)    
Predicted Functional Partners:
EKF02081.1
Putative thiamine biosynthesis protein; KEGG: amu:Amuc_0148 0.25 saccharopine dehydrogenase; K00290 saccharopine dehydrogenase (NAD+, L-lysine forming).
  
 0.950
EKE97879.1
Hypothetical protein; KEGG: bpn:BPEN_645 0.74 polA; DNA polymerase I; K02335 DNA polymerase I; Psort location: Cytoplasmic, score: 8.96.
 
     0.908
EKE96938.1
Molybdopterin converting factor, subunit 2; KEGG: ajs:Ajs_0142 0.85 intradiol ring-cleavage dioxygenase; K03381 catechol 1,2-dioxygenase.
  
 0.872
EKE97877.1
Hypothetical protein; KEGG: sag:SAG1017 0.99 sensor histidine kinase, putative; K02478 two-component system, LytT family, sensor kinase.
  
 
 0.866
thiG
Glycine oxidase ThiO; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.861
EKE97881.1
DNA methyltransferase; KEGG: cju:C8J_1452 0.0067 hsdM; type I restriction-modification system, M subunit K03427; Psort location: Cytoplasmic, score: 8.96.
 
     0.850
EKF04917.1
ThiS family protein; KEGG: mpa:MAP2713c 0.037 lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase.
   
 0.838
EKE99263.1
ThiS family protein; KEGG: ace:Acel_2055 3.6e-05 ferredoxin--nitrite reductase K00366.
   
 0.838
EKE97885.1
KEGG: ava:Ava_C0075 2.0e-226 DNA polymerase III beta subunit family protein K02338; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.797
EKE97875.1
Hypothetical protein; KEGG: hps:HPSH_03295 0.79 RNA polymerase factor sigma-54 K03092.
       0.774
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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