STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97929.1Hypothetical protein; KEGG: dgr:Dgri_GH14199 0.016 GH14199 gene product from transcript GH14199-RA; K11840 ubiquitin carboxyl-terminal hydrolase 9/24; Psort location: CytoplasmicMembrane, score: 9.82. (119 aa)    
Predicted Functional Partners:
EKE97928.1
KEGG: eci:UTI89_C0749 3.1e-54 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
       0.768
EKE97930.1
Hypothetical protein; KEGG: dpe:Dper_GL13309 0.75 GL13309 gene product from transcript GL13309-RA; K11406 histone deacetylase 4/5.
       0.668
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
 
   
 0.578
EKE97931.1
Heavy metal efflux pump, CzcA family; KEGG: dat:HRM2_00450 1.2e-116 rndA; RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.577
EKE97888.1
KEGG: pab:PAB1128 1.3e-21 polI; DNA polymerase I; K02319 DNA polymerase I; Psort location: Cytoplasmic, score: 8.96.
  
     0.534
EKE97971.1
Hypothetical protein; KEGG: ddi:DDB_0216334 0.69 vps15; protein serine/threonine kinase; K08333 phosphoinositide-3-kinase, regulatory subunit 4, p150.
  
     0.461
EKE97879.1
Hypothetical protein; KEGG: bpn:BPEN_645 0.74 polA; DNA polymerase I; K02335 DNA polymerase I; Psort location: Cytoplasmic, score: 8.96.
  
     0.400
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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