STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97938.1Hypothetical protein; KEGG: pmy:Pmen_2421 0.99 NADH dehydrogenase subunit K K00340; Psort location: CytoplasmicMembrane, score: 9.82. (90 aa)    
Predicted Functional Partners:
EKF01437.1
Eight transmembrane protein EpsH; KEGG: nca:Noca_2718 0.25 CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.881
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.815
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
   
 0.752
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
   
 0.717
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
  0.677
EKF04555.1
AMP-binding enzyme; KEGG: ava:Ava_C0009 0. amino acid adenylation; Psort location: CytoplasmicMembrane, score: 8.46.
   
 0.676
EKE99930.1
Hypothetical protein; KEGG: npu:Npun_R3452 0. AMP-dependent synthetase and ligase; Psort location: CytoplasmicMembrane, score: 8.46.
   
 0.676
EKE96607.1
AMP-binding enzyme; KEGG: ava:Ava_C0002 1.2e-217 amino acid adenylation K05914; Psort location: Cytoplasmic, score: 9.97.
   
 0.670
EKF04516.1
Cytochrome P450; KEGG: sen:SACE_3928 3.9e-63 cyp51; cytochrome P450 51 K05917; Psort location: Cytoplasmic, score: 9.97.
   
  0.659
EKF05620.1
Cytochrome P450; KEGG: npu:Npun_R3831 2.4e-173 cytochrome P450; Psort location: Cytoplasmic, score: 9.97.
    
  0.656
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.