STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97960.1MerR family transcriptional regulator; KEGG: eci:UTI89_C3737 4.5e-14 zntR; zinc-responsive transcriptional regulator; Psort location: Cytoplasmic, score: 8.96. (137 aa)    
Predicted Functional Partners:
EKF03785.1
KEGG: npu:Npun_F4123 7.4e-195 DNA polymerase III, subunits gamma and tau K02343.
    
  0.707
dnaX
DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
  0.707
EKE97891.1
KEGG: ana:alr7575 1.2e-137 DNA polymerase III subunit delta' K02341.
    
  0.707
rpoB
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.686
EKF02545.1
Sensor histidine kinase; KEGG: cyc:PCC7424_2839 1.5e-196 multi-sensor hybrid histidine kinase.
   
 
 0.676
EKF02169.1
Sensor histidine kinase; KEGG: cyn:Cyan7425_4417 1.0e-209 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.663
EKF01376.1
Sensor histidine kinase; KEGG: npu:Npun_F2908 0. multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.663
EKE97700.1
KEGG: npu:Npun_F6434 5.3e-130 DNA polymerase III, delta prime subunit K02341; Psort location: Cytoplasmic, score: 9.26.
    
  0.651
rpoZ
DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.643
rpoA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.643
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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