STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97963.1Hypothetical protein; KEGG: nca:Noca_3746 1.7e-17 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase. (292 aa)    
Predicted Functional Partners:
EKF01304.1
Helicase; KEGG: lsp:Bsph_0793 1.9e-08 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
    
 0.809
rtcA
RNA 3'-terminal-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.
   
 
  0.739
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
     
  0.708
EKE98068.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.707
EKF03212.1
KEGG: mms:mma_3088 1.2e-07 short-chain dehydrogenase/reductase SDR; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
  0.682
EKF04532.1
Beta-ketoacyl synthase protein; KEGG: saq:Sare_0551 0. erythronolide synthase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.668
EKE98050.1
ATPase, AAA family; KEGG: ava:Ava_C0030 1.2e-281 ATPase K06027.
  
 
  0.664
EKF06119.1
KEGG: npu:Npun_R3425 0. beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.663
EKF05346.1
KEGG: mgl:MGL_2782 1.7e-14 hypothetical protein; K03006 DNA-directed RNA polymerase II subunit A.
   
 0.663
EKE99923.1
KEGG: npu:Npun_R3426 0. beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.663
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.