STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97991.1Hypothetical protein; KEGG: ecu:ECU05_1070 0.39 similarity to HYPOTHETICAL PROTEINS OF THE RIO1 FAMILY RIO1_YEAST; K07178 RIO kinase 1; Psort location: Cytoplasmic, score: 8.96. (427 aa)    
Predicted Functional Partners:
EKE97992.1
Hypothetical protein; KEGG: pub:SAR11_0417 0.46 putative serine esterase K01175.
       0.773
EKE97993.1
Hypothetical protein; KEGG: ago:AGOS_AFR196C 0.18 AFR196Cp; K02266 cytochrome c oxidase subunit VIa.
       0.557
EKE97994.1
Hypothetical protein; KEGG: nha:Nham_4600 0.059 feruloyl esterase.
       0.553
EKE97990.1
Hypothetical protein; KEGG: xla:446424 0.91 qtrtd1; queuine tRNA-ribosyltransferase domain containing 1; K00773 queuine tRNA-ribosyltransferase.
       0.508
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.489
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.