STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98020.1KEGG: syg:sync_0407 0.00053 HNH endonuclease family protein K01157; Psort location: Cytoplasmic, score: 8.96. (425 aa)    
Predicted Functional Partners:
EKF00854.1
Hypothetical protein; KEGG: pto:PTO1155 0.22 DNA polymerase IV K04479; Psort location: Cytoplasmic, score: 8.96.
  
     0.524
EKF01322.1
Hypothetical protein; KEGG: bwe:BcerKBAB4_4254 0.19 (p)ppGpp synthetase I, SpoT/RelA; Psort location: Cytoplasmic, score: 8.96.
  
     0.497
EKE98021.1
Hypothetical protein; KEGG: plu:plu2841 0.54 rne; ribonuclease E; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 8.96.
       0.481
EKF04189.1
ICE-like protease p20 domain protein; KEGG: afm:AFUA_3G14140 6.2e-16 metacaspase CasB.
  
     0.477
EKE98881.1
Transposase; KEGG: tga:TGAM_0719 0.25 uppS; undecaprenyl pyrophosphate synthetase (di-trans-poly-cis-decaprenylcistransferase) (UppS) K00806; Psort location: Cytoplasmic, score: 8.96.
  
     0.468
EKF06041.1
Hypothetical protein; KEGG: dya:Dyak_GE16376 9.6e-07 GE16376 gene product from transcript GE16376-RA; K10532 heparan-alpha-glucosaminide N-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.438
EKE98062.1
KEGG: xtr:448246 0.68 MGC88972 protein; K00858 NAD+ kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
   0.435
EKF05320.1
Transposase; KEGG: sis:LS215_1079 1.1e-17 transposase, IS605 OrfB family.
  
     0.419
EKE98019.1
Hypothetical protein; KEGG: mpt:Mpe_A0026 0.97 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 8.96.
       0.412
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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