STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98068.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (280 aa)    
Predicted Functional Partners:
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.888
EKF06188.1
Hypothetical protein; KEGG: rha:RHA1_ro02535 0.77 rubA; alkene monooxygenase rubredoxin K00496; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.885
EKE98067.1
Hypothetical protein; KEGG: cts:Ctha_0209 0.93 phosphoribosylformylglycinamidine synthase, PurS; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 8.96.
 
     0.879
EKE96682.1
Hypothetical protein; KEGG: tma:TM0173 0.39 reverse gyrase K03170; Psort location: Cytoplasmic, score: 8.96.
    
 0.848
EKF00227.1
Putative Rad3 DNA helicase; KEGG: npu:Npun_F5207 8.0e-214 putative ATP-dependent DNA helicase DinG; K03722 ATP-dependent DNA helicase DinG; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.848
EKE98062.1
KEGG: xtr:448246 0.68 MGC88972 protein; K00858 NAD+ kinase; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.807
rpoB
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.803
EKE97888.1
KEGG: pab:PAB1128 1.3e-21 polI; DNA polymerase I; K02319 DNA polymerase I; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.801
EKE98050.1
ATPase, AAA family; KEGG: ava:Ava_C0030 1.2e-281 ATPase K06027.
 
 
   0.799
rpoA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.798
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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