STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97857.1Hypothetical protein; KEGG: edi:EDI_273920 3.7e-06 E3 ubiquitin protein ligase BRE1A; Psort location: Cytoplasmic, score: 8.96. (202 aa)    
Predicted Functional Partners:
EKE97859.1
GTP-binding protein, Rab family; KEGG: dme:Dmel_CG7062 3.7e-19 Rab-RP3; Rab-related protein 3 K07976.
 
     0.879
EKE97858.1
OmpA family protein; KEGG: fba:FIC_01393 0.00011 pyrophosphate-energized proton pump K01507.
 
     0.878
EKE97861.1
KEGG: ava:Ava_1175 3.6e-115 histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.838
EKF05088.1
Hypothetical protein; KEGG: car:cauri_0183 6.5e-07 GPI mannosyltransferase 2.
  
     0.626
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.597
EKE97856.1
Hypothetical protein; KEGG: cha:CHAB381_1309 0.74 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145.
       0.552
EKF01486.1
Putative filamentous hemagglutinin; KEGG: mmw:Mmwyl1_1672 2.0e-08 beta strand repeat-containing protein; Psort location: Extracellular, score: 9.64.
  
     0.544
EKE99090.1
Protein, filamentous hemagglutinin family; KEGG: mmw:Mmwyl1_1672 1.2e-23 beta strand repeat-containing protein; Psort location: Extracellular, score: 9.96.
  
     0.534
EKE97774.1
Putative filamentous hemagglutinin; KEGG: ava:Ava_4160 1.4e-18 VCBS K01317.
  
     0.505
EKE97690.1
Filamentous hemagglutinin; KEGG: ava:Ava_4160 8.0e-20 VCBS K01317.
  
     0.502
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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