STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97859.1GTP-binding protein, Rab family; KEGG: dme:Dmel_CG7062 3.7e-19 Rab-RP3; Rab-related protein 3 K07976. (165 aa)    
Predicted Functional Partners:
EKE97858.1
OmpA family protein; KEGG: fba:FIC_01393 0.00011 pyrophosphate-energized proton pump K01507.
 
     0.954
EKE97857.1
Hypothetical protein; KEGG: edi:EDI_273920 3.7e-06 E3 ubiquitin protein ligase BRE1A; Psort location: Cytoplasmic, score: 8.96.
 
     0.879
EKF01032.1
Hypothetical protein; KEGG: bcz:BCZK2789 0.00051 prpA; serine/threonine protein phosphatase K01090.
    
 0.863
EKF00403.1
Putative heat shock protein DnaJ; KEGG: ava:Ava_4855 2.0e-57 WD-40 repeat-containing serine/threonin protein kinase K00908; Psort location: CytoplasmicMembrane, score: 9.50.
    
  0.852
EKF03999.1
Hypothetical protein; KEGG: sis:LS215_0273 1.1e-05 tyrosine specific protein phosphatase.
    
 0.842
EKE97860.1
Hypothetical protein; KEGG: vpa:VPA0309 0.99 nicotinate phosphoribosyltransferase K00763.
   
   0.827
EKE97861.1
KEGG: ava:Ava_1175 3.6e-115 histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.786
EKF06011.1
Hypothetical protein; KEGG: cyh:Cyan8802_2263 0. glucosylceramidase.
    
 0.757
EKF03314.1
Hypothetical protein; KEGG: cja:CJA_0651 0.044 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96.
    
 0.747
EKE97140.1
Chaperone HtpG; KEGG: eci:UTI89_C0501 6.3e-63 htpG; heat shock protein 90 K04079.
   
 0.737
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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