STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97860.1Hypothetical protein; KEGG: vpa:VPA0309 0.99 nicotinate phosphoribosyltransferase K00763. (138 aa)    
Predicted Functional Partners:
EKE97859.1
GTP-binding protein, Rab family; KEGG: dme:Dmel_CG7062 3.7e-19 Rab-RP3; Rab-related protein 3 K07976.
   
   0.827
EKE97858.1
OmpA family protein; KEGG: fba:FIC_01393 0.00011 pyrophosphate-energized proton pump K01507.
       0.773
EKE97861.1
KEGG: ava:Ava_1175 3.6e-115 histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
   
   0.726
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
    
  0.597
EKF01001.1
Hypothetical protein; KEGG: cgt:cgR_1633 0.080 phosphoenolpyruvate carboxylase K01595.
    
  0.597
EKF05874.1
Protein-glutamate methylesterase CheB; KEGG: ava:Ava_0314 4.3e-67 signal transduction histidine kinase (STHK) with CheB and CheR activity; K00575 chemotaxis protein methyltransferase CheR K00936:K03412; Psort location: Cytoplasmic, score: 9.26.
   
 0.571
EKF03314.1
Hypothetical protein; KEGG: cja:CJA_0651 0.044 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.540
EKF00179.1
Tyrosine decarboxylase family protein; KEGG: cyh:Cyan8802_0909 2.9e-193 aromatic-L-amino-acid decarboxylase; Psort location: Cytoplasmic, score: 8.96.
     
  0.512
EKE98522.1
KEGG: tet:TTHERM_00031810 9.6e-33 ABC transporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.494
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.479
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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