STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97778.1YcaO-like family protein; KEGG: cby:CLM_0574 0.012 bacteriocin biosynthesis cyclodehydratase, SagC family; Psort location: Cytoplasmic, score: 8.96. (745 aa)    
Predicted Functional Partners:
EKE96495.1
SagB-type dehydrogenase domain protein; KEGG: tth:TTC1977 0.00078 glucose-1-phosphate adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.872
EKF00816.1
S8A subfamily subtilase; KEGG: bbe:BBR47_17720 2.5e-12 putative extracellular serine protease precursor; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.739
EKF05053.1
U48 family peptidase; KEGG: gfo:GFO_0014 6.8e-05 metal-dependent membrane protease K01376.
  
  
 0.643
EKF04474.1
CAAX amino terminal protease family protein; KEGG: gfo:GFO_0014 0.017 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.643
EKF04475.1
Putative abortive infection protein; KEGG: gfo:GFO_0014 1.0e-05 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.643
EKE97149.1
KEGG: sds:SDEG_1426 0.00047 CAAX amino terminal protease family protein.
  
  
 0.643
EKF03118.1
Putative abortive infection protein; KEGG: sds:SDEG_1426 1.2e-09 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.643
EKF00512.1
KEGG: sds:SDEG_0144 0.029 membrane-bound protease CAAX family.
  
  
 0.643
EKE97779.1
KEGG: shn:Shewana3_3829 4.6e-38 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); Psort location: Cytoplasmic, score: 9.97.
       0.581
EKF04535.1
Hypothetical protein; KEGG: avn:Avin_36680 4.3e-09 ybgC; acyl-coenzyme A thioester hydrolase; K01075 4-hydroxybenzoyl-CoA thioesterase.
  
     0.554
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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