STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97779.1KEGG: shn:Shewana3_3829 4.6e-38 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); Psort location: Cytoplasmic, score: 9.97. (316 aa)    
Predicted Functional Partners:
EKF02294.1
Cyclic diguanylate phosphodiesterase domain protein; KEGG: noc:Noc_1271 2.9e-63 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.993
EKF05874.1
Protein-glutamate methylesterase CheB; KEGG: ava:Ava_0314 4.3e-67 signal transduction histidine kinase (STHK) with CheB and CheR activity; K00575 chemotaxis protein methyltransferase CheR K00936:K03412; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.985
EKF00301.1
HAMP domain protein; KEGG: ava:Ava_4696 0. GAF sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.976
EKE98428.1
Sensor histidine kinase; KEGG: ava:Ava_1564 3.7e-276 multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.969
EKE99368.1
Sensor histidine kinase; KEGG: ava:Ava_1564 0. multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.963
EKE96880.1
PAS domain S-box; KEGG: syn:slr1759 2.1e-245 hybrid sensory kinase; K02489 two-component system, PleD related family, sensor kinase and response regulator; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.961
EKF04830.1
Response regulator; KEGG: ava:Ava_4779 0. multi-sensor hybrid histidine kinase K00936.
  
 
 0.959
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.951
EKF02545.1
Sensor histidine kinase; KEGG: cyc:PCC7424_2839 1.5e-196 multi-sensor hybrid histidine kinase.
  
 
 0.934
EKF02444.1
Putative sensor histidine kinase; KEGG: rci:RCIX1713 1.1e-58 putative signal transduction histidine kinase K00936; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.934
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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