Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKE97809.1Pyridoxamine 5'-phosphate oxidase family protein; KEGG: lma:LmjF31.2940 0.97 farnesyltransferase K00801. (171 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.907
EKF00097.1
Ferrochelatase; KEGG: npu:Npun_F1738 2.4e-180 ferrochelatase K01772; Psort location: Cytoplasmic, score: 8.96; Belongs to the ferrochelatase family.
     
 0.907
EKE97405.1
Heme oxygenase; KEGG: npu:Npun_R4585 1.6e-89 heme oxygenase K00510.
    
  0.906
EKF03070.1
Heme oxygenase; KEGG: cyh:Cyan8802_0098 1.0e-80 heme oxygenase; Psort location: Cytoplasmic, score: 8.96.
    
  0.906
EKF01648.1
Heme oxygenase; KEGG: ava:Ava_3767 2.7e-110 heme oxygenase K00510.
    
  0.906
EKE99354.1
Heme oxygenase; KEGG: cyc:PCC7424_2604 1.9e-93 heme oxygenase K00510; Psort location: Cytoplasmic, score: 8.96.
    
  0.906
EKF04032.1
Ferritin-like domain protein; KEGG: xca:xccb100_3299 7.0e-09 putative bacterioferritin K03594; Psort location: Cytoplasmic, score: 8.96.
     
  0.900
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
EKF01240.1
Hypothetical protein; KEGG: rso:RSc1744 0.89 putative isomerase rotamase signal peptide protein.
  
  
 0.793
EKE97400.1
KEGG: ava:Ava_3046 0. ferredoxin (flavodoxin) oxidoreductase K03737.
    
   0.595
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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