STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97824.1KEGG: sds:SDEG_0016 8.8e-16 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00. (499 aa)    
Predicted Functional Partners:
EKF02961.1
KEGG: npu:Npun_F0013 0. alpha amylase, catalytic region; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.843
EKE98420.1
Alpha amylase, catalytic domain protein; KEGG: ana:alr0169 3.3e-240 cyclomaltodextrin glucanotransferase; K00701 cyclomaltodextrin glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.822
EKE97207.1
KEGG: ana:alr2190 4.6e-257 cytoplasmic alpha-amylase K01176; Psort location: Cytoplasmic, score: 9.97.
    
 0.822
EKF03173.1
KEGG: npu:Npun_R6073 2.7e-245 alpha amylase, catalytic region; Psort location: Cytoplasmic, score: 9.26.
    
 0.822
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
    
  0.634
EKE97821.1
Cadmium resistance transporter family protein; KEGG: ctj:JALI_5391 0.996 dnaQ2; DNA polymerase III, epsilon chain; K02342 DNA polymerase III subunit epsilon; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.621
EKE97822.1
Hypothetical protein; KEGG: pti:PHATR_13326 0.9998 RPC11; RNA polymerase C subunit 11 kDa; K03019 DNA-directed RNA polymerase III subunit C11.
       0.605
EKF00872.1
Drug resistance MFS transporter, drug:H+ antiporter-2 (DHA2) family protein; KEGG: fgr:FG00711.1 2.5e-30 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily.
  
  
 0.605
EKF03570.1
Drug resistance MFS transporter, drug:H+ antiporter-2 (DHA2) family protein; KEGG: fgr:FG00711.1 2.3e-27 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily.
  
  
 0.594
EKF03368.1
KEGG: lsp:Bsph_3093 2.8e-14 putative methyltransferase.
  
  
  0.593
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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