STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKE97683.1ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; KEGG: ava:Ava_4885 3.1e-96 PAS/PAC sensor signal transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00. (581 aa)    
Predicted Functional Partners:
EKE97684.1
ABC superfamily ATP binding cassette; KEGG: dde:Dde_2997 0.81 rpoB; DNA-directed RNA polymerase subunit beta K03043.
 
     0.805
EKF05998.1
Response regulator; KEGG: ava:Ava_2239 6.9e-55 adenylate/guanylate cyclase K01768; Psort location: Periplasmic, score: 9.80.
  
 
   0.787
EKE96601.1
Stage II sporulation protein E; KEGG: npu:Npun_R0896 3.0e-69 multi-sensor hybrid histidine kinase; Psort location: Cytoplasmic, score: 9.97.
 
 
   0.759
EKF02589.1
Sensor histidine kinase; KEGG: cag:Cagg_2019 3.8e-27 GAF sensor hybrid histidine kinase.
 
 
 
 0.702
EKF02518.1
Sensor histidine kinase; KEGG: chl:Chy400_1720 2.2e-30 GAF sensor hybrid histidine kinase.
 
 
 
0.597
EKE97682.1
Hypothetical protein; KEGG: tpt:Tpet_0181 0.92 tRNA methyltransferase complex GCD14 subunit; K07442 tRNA (adenine-N1-)-methyltransferase.
       0.586
EKF02545.1
Sensor histidine kinase; KEGG: cyc:PCC7424_2839 1.5e-196 multi-sensor hybrid histidine kinase.
  
 
 0.520
EKF04056.1
Sensor histidine kinase; KEGG: npu:Npun_R0896 0. multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.496
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.464
EKF05874.1
Protein-glutamate methylesterase CheB; KEGG: ava:Ava_0314 4.3e-67 signal transduction histidine kinase (STHK) with CheB and CheR activity; K00575 chemotaxis protein methyltransferase CheR K00936:K03412; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.435
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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