STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97507.1Putative acetoin/glycerol; KEGG: chl:Chy400_3426 9.2e-09 GAF sensor signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD; Psort location: Cytoplasmic, score: 8.96. (399 aa)    
Predicted Functional Partners:
EKE97506.1
Response regulator; KEGG: syp:SYNPCC7002_A2835 5.8e-14 histidine kinase response regulator hybrid protein; K11527 two-component system, unclassified family, sensor histidine kinase and response regulator; Psort location: Cytoplasmic, score: 9.26.
 
     0.803
EKF03219.1
KEGG: npu:Npun_R5519 2.3e-81 dihydroxyacetone kinase, L subunit K05879.
   
 
 0.767
EKF03221.1
KEGG: npu:Npun_R5520 2.2e-163 dihydroxyacetone kinase, DhaK subunit K05878; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.767
EKF02422.1
Hypothetical protein; KEGG: ooe:OEOE_1456 0.36 ABC-type sugar transport system, ATPase component; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.708
rbsA
ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
   
  
 0.627
EKF01515.1
Putative outer membrane protein; KEGG: chu:CHU_1027 1.1e-09 hypothetical protein K01238.
  
     0.616
EKF04436.1
NACHT domain protein; KEGG: rha:RHA1_ro06851 0.23 putative oxidoreductase/heat repeat-containing protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.595
EKF00272.1
Putative NTP-binding protein; KEGG: nph:NP2168A 0.0034 che operon protein (homolog 1 to phycocyanobilin lyase subunit); Psort location: Cytoplasmic, score: 8.96.
  
     0.583
EKF03413.1
Tropomyosin-2; KEGG: edi:EDI_309330 0.037 Tropomyosin-2; Psort location: Cytoplasmic, score: 8.96.
  
     0.564
EKF02318.1
Sensor histidine kinase; KEGG: ava:Ava_4701 0. multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.557
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.