STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE97546.1Putative squalene/phytoene synthase; KEGG: ana:alr1805 5.4e-128 hypothetical protein; K00801 farnesyl-diphosphate farnesyltransferase. (287 aa)    
Predicted Functional Partners:
EKF01819.1
Hypothetical protein; KEGG: fph:Fphi_0234 0.9990 peptidoglycan glycosyltransferase K03587; Psort location: Cytoplasmic, score: 8.96.
    
 0.957
EKF00815.1
Hypothetical protein; KEGG: eic:NT01EI_0111 0.9996 adenylate cyclase, class I K05851; Psort location: Cytoplasmic, score: 8.96.
    
 0.957
EKE99363.1
KEGG: chu:CHU_3295 2.1e-48 smt; SAM-dependent methyltransferase K00599; Psort location: Cytoplasmic, score: 8.96.
    
 0.957
EKE97812.1
Putative mucleoside-diphosphate-sugar epimerase; KEGG: mar:MAE_23570 1.3e-17 3-beta hydroxysteroid dehydrogenase/isomerase.
  
 0.941
EKF03212.1
KEGG: mms:mma_3088 1.2e-07 short-chain dehydrogenase/reductase SDR; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.939
EKF01189.1
Squalene-hopene cyclase; KEGG: npu:Npun_R6245 0. squalene/oxidosqualene cyclase K06045; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.933
EKF02451.1
Fatty acid hydroxylase family protein; KEGG: lbi:LEPBI_I0761 1.5e-13 putative sterol desaturase; putative membrane protein.
  
 0.912
EKF03396.1
Fatty acid hydroxylase family protein; KEGG: uma:UM03593.1 0.011 hypothetical protein; K09830 C-5 sterol desaturase; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.911
EKE97244.1
KEGG: kcr:Kcr_1079 4.3e-32 polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase.
  
 0.897
ndhJ
NADH dehydrogenase, subunit C; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
 0.889
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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