STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE97571.1Twitching motility protein; KEGG: cco:CCC13826_1231 7.8e-29 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97. (374 aa)    
Predicted Functional Partners:
EKE97572.1
Putative type IV fimbrial assembly protein PilC; KEGG: cno:NT01CX_1642 0.053 atpI; V-type ATP synthase subunit I K02123; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.916
EKE96870.1
Type IV pilus assembly protein PilM; KEGG: hiq:CGSHiGG_09370 0.033 ddl; D-alanine--D-alanine ligase K03590; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.849
EKF04256.1
Type IV prepilin leader peptidase family protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.836
EKE97570.1
KEGG: pen:PSEEN2333 7.1e-87 XcpR-2; type II secretion pathway protein E K02454; Psort location: Cytoplasmic, score: 9.97.
 
  
0.788
EKF03668.1
Prepilin-type cleavage/methylation domain protein; KEGG: smd:Smed_6316 0.92 histidinol-phosphate aminotransferase K00817; Psort location: Extracellular, score: 9.71.
 
   
 0.715
EKE97569.1
Toxin-antitoxin system, toxin component, HicA domain protein; KEGG: rak:A1C_06135 0.76 NADH dehydrogenase subunit I K00338.
       0.437
EKE96873.1
Type II secretory pathway protein; KEGG: mmw:Mmwyl1_1672 8.2e-06 beta strand repeat-containing protein; Psort location: OuterMembrane, score: 9.99.
 
   
 0.431
EKE97040.1
Putative DNA internalization competence protein ComEC/Rec2; KEGG: stp:Strop_2269 0.027 apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.426
EKF00301.1
HAMP domain protein; KEGG: ava:Ava_4696 0. GAF sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.414
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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