STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97582.1Putative arsenate reductase; KEGG: ote:Oter_3671 1.0e-37 protein tyrosine phosphatase; K03741 arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (145 aa)    
Predicted Functional Partners:
EKF00481.1
KEGG: sen:SACE_5143 6.0e-51 arsenical resistance protein/arsenate reductase K03741; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.944
EKE98507.1
Hypothetical protein; KEGG: kko:Kkor_1879 0.56 transcriptional regulator, AraC family; K01247 DNA-3-methyladenine glycosylase II K10778; Psort location: CytoplasmicMembrane, score: 9.82.
    
 
 0.709
EKE96830.1
KEGG: npu:Npun_R3962 1.7e-44 thioredoxin domain-containing protein K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
   
 
 0.640
EKF03727.1
KEGG: npu:Npun_R6186 1.2e-52 thioredoxin domain-containing protein K03671; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
   
 
 0.639
EKF03540.1
Thioredoxin; KEGG: ava:Ava_2654 1.0e-48 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
   
 
 0.632
EKF01631.1
Thioredoxin; KEGG: npu:Npun_F6249 4.8e-49 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
   
 
 0.632
EKF04927.1
Tetratricopeptide repeat protein; KEGG: nve:NEMVE_v1g239520 4.4e-35 hypothetical protein; K09667 polypeptide N-acetylglucosaminyltransferase.
   
 
 0.602
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.594
ybeY
TIGR00043 protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.586
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.583
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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