STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97609.1Transport energizing protein, ExbD/TolR family; KEGG: rpb:RPB_2883 0.63 signal transduction histidine kinase, nitrogen specific, NtrB; K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL; Psort location: CytoplasmicMembrane, score: 9.82. (134 aa)    
Predicted Functional Partners:
EKE97610.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: hip:CGSHiEE_01075 8.8e-05 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.995
EKE99065.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: hip:CGSHiEE_01075 3.7e-05 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.979
EKF03498.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: scl:sce1353 0.81 kdpB; potassium-transporting ATPase B chain K01547; Psort location: CytoplasmicMembrane, score: 9.46.
 
 
 0.975
EKE98637.1
Hypothetical protein; KEGG: dme:Dmel_CG12781 1.3e-39 nahoda; CG12781 gene product from transcript CG12781-RA K00503.
  
 
 0.933
EKE99066.1
Gram-negative bacterial TonB protein; KEGG: xfa:XF0818 2.7e-24 endo-1,4-beta-glucanase; K01179 endoglucanase; Psort location: Extracellular, score: 8.44.
 
 
 0.910
EKF04066.1
KEGG: ava:Ava_1781 3.1e-102 hypothetical protein K01317.
  
 
 0.890
EKF04115.1
KEGG: bta:338067 0.21 PRKCSH; protein kinase C substrate 80K-H K08288; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.838
EKE99741.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_1638 2.1e-112 ABC transporter-like K06861.
 
   
 0.703
EKF01238.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.678
lpxA
acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.665
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.