STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97616.1Putative TetR family protein; KEGG: bcl:ABC2937 1.9e-05 NADH dehydrogenase K03885; Psort location: Cytoplasmic, score: 8.96. (191 aa)    
Predicted Functional Partners:
EKE97615.1
KEGG: npu:Npun_F2138 3.7e-43 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.693
EKF05709.1
Sensor histidine kinase; KEGG: ava:Ava_2524 8.2e-244 multi-sensor signal transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
      
 0.599
EKF03960.1
Catabolite activator protein; KEGG: eci:UTI89_C3860 1.4e-12 crp; cAMP-regulatory protein K10914.
      
 0.532
EKE99146.1
Fur family transcriptional regulator; KEGG: sbc:SbBS512_E4551 0.29 zur; zinc uptake transcriptional repressor K09823; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.
      
 0.526
EKE97617.1
Hypothetical protein; KEGG: rca:Rcas_4347 0.72 transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase.
       0.517
EKE97613.1
ABC exporter transmembrane subunit, DevC protein; KEGG: mav:MAV_3808 0.56 2'-hydroxybiphenyl-2-sulfinate desulfinase K05977; Psort location: CytoplasmicMembrane, score: 9.46.
 
     0.483
EKF05208.1
Response regulator; KEGG: ava:Ava_1878 1.6e-121 two component transcriptional regulator K11329.
      
 0.460
EKE99201.1
Putative PadR family protein; KEGG: edi:EDI_204390 0.98 myosin-2 heavy chain, non muscle.
  
     0.436
EKF02401.1
KEGG: mla:Mlab_1694 0.0011 TetR family transcriptional regulator K01409; Psort location: Cytoplasmic, score: 8.96.
  
     0.412
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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