Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97410.1Hypothetical protein; KEGG: amr:AM1_0450 2.5e-20 Rieske iron-sulfur (cyt b6f) fusion protein; K02636 cytochrome b6-f complex iron-sulfur subunit; Psort location: Cytoplasmic, score: 8.96. (173 aa)    
Predicted Functional Partners:
EKE96947.1
KEGG: npu:Npun_F5722 1.1e-88 glutathione S-transferase domain-containing protein K03599; Psort location: Cytoplasmic, score: 8.96.
 
      0.669
EKF02676.1
KEGG: npu:Npun_R4998 0. peptidase M16 domain-containing protein K07263.
  
     0.468
EKF05553.1
KEGG: npu:Npun_F5153 0. peptidase M16 domain-containing protein K07263.
  
     0.465
EKE97411.1
Hypothetical protein; KEGG: sbi:SORBI_03g034000 0.92 SORBIDRAFT_03g034000; hypothetical protein; K05954 protein farnesyltransferase subunit beta.
       0.432
EKE99066.1
Gram-negative bacterial TonB protein; KEGG: xfa:XF0818 2.7e-24 endo-1,4-beta-glucanase; K01179 endoglucanase; Psort location: Extracellular, score: 8.44.
  
     0.414
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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