STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97414.1KEGG: btl:BALH_3229 1.6e-05 sigW; ECF subfamily RNA polymerase sigma factor K03088. (388 aa)    
Predicted Functional Partners:
EKE97415.1
Hypothetical protein; KEGG: aci:ACIAD0830 0.51 cafA; ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein) K08301.
 
     0.889
EKE98609.1
ICE-like protease p20 domain protein; KEGG: cya:CYA_2756 5.8e-15 protein kinase K00924; Psort location: Cytoplasmic, score: 8.96.
  
     0.772
EKF03168.1
Tetratricopeptide repeat protein; KEGG: gfo:GFO_2705 0.0017 two-component system sensor histidine kinase/response regulator hybrid K00936.
  
     0.701
EKF05227.1
Hypothetical protein; KEGG: tws:TW296 0.77 nadD; nicotinic acid mononucleotide adenylyltransferase K00969.
  
     0.664
EKF05571.1
Hypothetical protein; KEGG: dme:Dmel_CG17927 9.4e-11 Mhc; Myosin heavy chain K10352; Psort location: CytoplasmicMembrane, score: 9.80.
  
     0.605
EKF01170.1
Hypothetical protein; KEGG: lsp:Bsph_0334 0.10 D-3-phosphoglycerate dehydrogenase.
  
     0.591
EKF03545.1
Hypothetical protein; KEGG: ddi:DDB_0216279 1.1e-06 papA; poly(A) polymerase; K00970 poly(A) polymerase; Psort location: OuterMembrane, score: 9.49.
  
     0.586
EKE98414.1
Hypothetical protein; KEGG: eli:ELI_06605 0.052 NADH-quinone oxidoreductase chain M; K00342 NADH dehydrogenase I subunit M; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.550
EKF00209.1
Hypothetical protein; KEGG: pst:PSPTO_3646 0.00052 dnaZX; DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau; Psort location: Cytoplasmic, score: 8.96.
  
     0.548
EKE97305.1
KEGG: sha:SH2234 0.999 hypothetical protein; K02484 two-component system, OmpR family, sensor kinase.
  
     0.545
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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