STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97336.1Hypothetical protein; KEGG: lxx:Lxx16070 0.33 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 9.86. (158 aa)    
Predicted Functional Partners:
EKE97334.1
Hypothetical protein; KEGG: pst:PSPTO_0130 0.52 uroporphyrin-III C-methyltransferase, putative; K02496 uroporphyrin-III C-methyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.625
EKE97335.1
Hypothetical protein; KEGG: eci:UTI89_C0905 0.013 ftsK; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 9.82.
       0.625
EKE97337.1
Hypothetical protein; KEGG: cla:Cla_0667 0.97 oxygen-independent coproporphyrinogen III oxidase HemN, putative; K02495 oxygen-independent coproporphyrinogen III oxidase.
       0.546
EKE97330.1
KEGG: ava:Ava_3135 3.2e-07 hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.452
EKE97331.1
Hypothetical protein; KEGG: pat:Patl_1213 0.994 malate synthase G K01638.
       0.452
EKE97332.1
Hypothetical protein; KEGG: pai:PAE1577 0.18 NADH-ubiquinone oxidoreductase subunit; K00340 NADH dehydrogenase I subunit K; Psort location: CytoplasmicMembrane, score: 10.00.
       0.452
EKE97333.1
Hypothetical protein; KEGG: cdi:DIP1604 0.14 ftsI; putative penicillin-binding (cell division related) protein; K03587 cell division protein FtsI (penicillin-binding protein 3).
       0.452
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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