STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97341.1Putative PilT protein; KEGG: fjo:Fjoh_3808 0.59 3-oxoacyl-(ACP) synthase III; K00660 chalcone synthase. (145 aa)    
Predicted Functional Partners:
EKE97527.1
Toxin-antitoxin system, antitoxin component, AbrB family; KEGG: pfa:PF13_0257 0.25 glutamate--tRNA ligase K01885.
 
 
 0.789
EKE97340.1
Hypothetical protein; KEGG: spx:SPG_1209 0.29 ntpB; V-type ATP synthase subunit B K02118; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKE97526.1
Toxin-antitoxin system, toxin component, PIN family; KEGG: chu:CHU_0509 0.095 nuoI; NADH dehydrogenase I chain A; K00330 NADH dehydrogenase I subunit A.
  
     0.677
EKF04111.1
Hypothetical protein; KEGG: vei:Veis_4712 0.64 serine O-acetyltransferase K00640.
  
     0.671
vapC
Toxin-antitoxin system, toxin component, PIN family; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.630
EKF02655.1
Hypothetical protein; KEGG: cja:CJA_3491 0.051 ATP-dependent DNA helicase RecG K03655.
  
     0.540
EKE97338.1
Putative sporulation initiation inhibitor protein Soj; KEGG: sen:SACE_5241 3.8e-40 chromosome partitioning protein (partial match) K03496; Psort location: Cytoplasmic, score: 8.96.
       0.515
EKE97339.1
Partitioning protein ParB; KEGG: cti:RALTA_A3100 4.5e-21 parB1; exonuclease involved in chromosome partitioning, ParB protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
       0.515
EKE97342.1
Hypothetical protein; KEGG: gfo:GFO_1082 0.045 ABC-type transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein.
       0.511
EKE97102.1
Toxin-antitoxin system, antitoxin component, HicB family; KEGG: mei:Msip34_1182 0.65 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
  
     0.476
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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