STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97345.1Hypothetical protein; KEGG: ckl:CKL_0602 0.98 proS; prolyl-tRNA synthetase K01881. (205 aa)    
Predicted Functional Partners:
EKF06097.1
KEGG: ctc:CTC02329 0.072 hypothetical protein; K02121 V-type H+-transporting ATPase subunit E.
  
     0.723
EKF01770.1
Hypothetical protein; KEGG: plu:plu3953 0.67 nudF; ADP-ribose pyrophosphatase NudF K01515; Psort location: Cytoplasmic, score: 8.96.
  
     0.695
EKF00233.1
Hypothetical protein; KEGG: pmj:P9211_02581 0.21 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435.
  
     0.685
EKE99804.1
Hypothetical protein; KEGG: kol:Kole_0037 0.38 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.683
EKF05378.1
Putative nuclease.
  
     0.675
EKE99219.1
Hypothetical protein; KEGG: tan:TA11140 0.64 Rab geranylgeranyltransferase; K05956 protein geranylgeranyltransferase type II; Psort location: Cytoplasmic, score: 8.96.
  
     0.674
EKF06232.1
Putative nuclease; KEGG: mem:Memar_0572 0.28 ribonuclease P, Rpp29; K03538 ribonuclease P subunit P29; Psort location: Cytoplasmic, score: 8.96.
  
     0.664
EKE99480.1
Hypothetical protein; KEGG: bid:Bind_0020 0.28 tyrosyl-tRNA synthetase K01866; Psort location: Cytoplasmic, score: 8.96.
  
     0.636
EKF04088.1
Putative nuclease; KEGG: amu:Amuc_1262 0.42 pyridoxamine 5'-phosphate oxidase K00275; Psort location: Cytoplasmic, score: 8.96.
  
     0.630
EKE98681.1
Hypothetical protein; KEGG: mmr:Mmar10_0109 0.995 3'-5' exonuclease; K03684 ribonuclease D; Psort location: Cytoplasmic, score: 8.96.
  
     0.609
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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