STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE97264.1ATP-binding protein, SMC family; KEGG: aoe:Clos_1119 0.0031 phosphate ABC transporter, ATPase subunit; K02036 phosphate transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96. (362 aa)    
Predicted Functional Partners:
EKE97113.1
Hypothetical protein; KEGG: rec:RHECIAT_PA0000063 0.42 pcaD; beta-ketoadipate enol-lactone hydrolase protein.
   
    0.639
purK
Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
 
      0.630
EKE97263.1
KEGG: aas:Aasi_1198 0.36 hypothetical protein; K04075 cell cycle protein MesJ.
       0.475
EKE97265.1
Hypothetical protein; KEGG: rno:266712 0.017 Rnf40; ring finger protein 40 K10696; Psort location: Cytoplasmic, score: 8.96.
       0.463
EKE97266.1
Tetratricopeptide repeat protein; KEGG: ddi:DDB_0232265 0.011 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 8.96.
       0.463
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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