STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97318.1Putative conjugative relaxaseTrwC; KEGG: ccs:CCNA_00474 2.8e-96 trwC; DNA relaxase/conjugal transfer nickase-helicase TrwC. (1511 aa)    
Predicted Functional Partners:
EKE97317.1
KEGG: pay:PAU_00482 0.21 hypothetical protein; K00612 carbamoyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKE96540.1
Conjugation protein TrwB; KEGG: btr:Btr_0809 0.27 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.618
EKE97316.1
KEGG: mms:mma_2932 0.50 pcm2; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573.
       0.459
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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