STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE97322.1NADH dehydrogenase subunit 4; KEGG: pop:Poptr_cp079 0.29 ndhD;K05575; Psort location: CytoplasmicMembrane, score: 9.82. (56 aa)    
Predicted Functional Partners:
EKF01388.1
TIGR02688 protein; KEGG: npu:Npun_F5664 1.5e-128 hypothetical protein; K01338 ATP-dependent Lon protease; Psort location: Cytoplasmic, score: 8.96.
  
    0.632
EKF04968.1
Putative fibronectin-binding protein; KEGG: mpt:Mpe_A3065 0.051 flgJ; flagellum-specific muramidase K02395.
  
    0.593
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.583
EKE97240.1
Hypothetical protein; KEGG: pop:Poptr_cp094 0.41 ndhB; NADH dehydrogenase subunit 2.
       0.526
EKE97321.1
Transposase; KEGG: hac:Hac_0006 0.995 recG; ATP-dependent DNA helicase RecG K03655; Psort location: Cytoplasmic, score: 8.96.
      
0.513
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.