STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE97175.1FeS assembly protein SufD; KEGG: sme:SM_b20317 0.52 putative sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein. (448 aa)    
Predicted Functional Partners:
EKE97174.1
KEGG: ava:Ava_0425 6.4e-125 FeS assembly ATPase SufC K09013.
 
 0.999
EKE97176.1
KEGG: npu:Npun_F4825 2.0e-208 SufS subfamily cysteine desulfurase K11717; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.996
EKE99976.1
KEGG: ava:Ava_1826 9.1e-190 cysteine desulphurase-like protein; Psort location: Cytoplasmic, score: 9.97.
 
 0.936
EKE97003.1
SUF system FeS assembly protein, NifU family; KEGG: cco:CCC13826_1162 0.0053 ilvH; acetolactate synthase small subunit K04488:K07400.
 
  
 0.908
EKF04401.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.886
EKF03980.1
Aminotransferase, class V; KEGG: npu:Npun_F1365 7.6e-154 aminotransferase, class V K11325; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.839
EKE98535.1
Aminotransferase, class V; KEGG: mxa:MXAN_5758 6.9e-121 cefD; isopenicillin N epimerase K04127; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.809
EKE97173.1
SUF system FeS cluster assembly; KEGG: chu:CHU_2784 0.83 arcB; multi-sensor hybrid histidine kinase K00936.
 
   
0.793
EKF03455.1
Fe-S metabolism protein SufE; KEGG: eic:NT01EI_0816 1.1e-10 cysteine desulfurase, sulfur acceptor subunit CsdE, putative K02426; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.712
EKF05074.1
Putative HesB family protein; KEGG: hiq:CGSHiGG_02350 1.0e-16 iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family.
  
 
 0.592
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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