STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE97114.1Putative XRE family protein. (167 aa)    
Predicted Functional Partners:
EKE97094.1
Hypothetical protein; KEGG: tpe:Tpen_0304 0.00015 AAA family ATPase, CDC48 subfamily protein K06027; Psort location: Cytoplasmic, score: 8.96.
  
   0.978
EKF00493.1
Hypothetical protein; KEGG: mdo:100017469 0.30 similar to Kinase insert domain receptor; K05096 FMS-like tyrosine kinase 1; Psort location: Cytoplasmic, score: 8.96.
    
   0.975
EKE97095.1
Integrase; KEGG: sme:SMc00710 0.31 hisC1; histidinol-phosphate aminotransferase K00817; Psort location: Cytoplasmic, score: 8.96.
   
   0.882
EKF03906.1
Hypothetical protein; KEGG: tva:TVAG_387410 4.4e-08 viral A-type inclusion protein; K02331 DNA polymerase phi subunit.
    
   0.831
EKE97115.1
Hypothetical protein; KEGG: tdn:Suden_0858 0.80 polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase.
  
   0.807
EKF04001.1
Putative integrase; KEGG: dme:Dmel_CG17927 0.026 Mhc; Myosin heavy chain K10352; Psort location: Cytoplasmic, score: 8.96.
   
   0.716
EKF03927.1
Hypothetical protein; KEGG: ype:YPO3689 0.18 putative ribonuclease; Psort location: Cytoplasmic, score: 8.96.
   
   0.716
EKE98289.1
Transposase; KEGG: xca:xccb100_1123 0.20 clpB; ATP-dependent Clp protease K03695; Psort location: Cytoplasmic, score: 8.96.
  
   0.491
EKE97259.1
Transposition protein; KEGG: spl:Spea_2419 0.27 exodeoxyribonuclease V, gamma subunit; K03583 exodeoxyribonuclease V gamma subunit; Psort location: Cytoplasmic, score: 8.96.
  
   0.491
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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