STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE96950.1FAD binding domain protein; KEGG: npu:Npun_R2389 2.8e-273 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; Psort location: CytoplasmicMembrane, score: 7.88. (570 aa)    
Predicted Functional Partners:
EKE97154.1
KEGG: npu:Npun_F5945 1.9e-157 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.996
EKE97400.1
KEGG: ava:Ava_3046 0. ferredoxin (flavodoxin) oxidoreductase K03737.
  
 
 0.969
EKF00361.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.969
EKE98858.1
succinate-CoA ligase, beta subunit; KEGG: npu:Npun_F5183 7.8e-168 ATP-grasp domain-containing protein K01903; Psort location: Cytoplasmic, score: 8.96.
 
 0.911
EKE98860.1
Putative succinyl-CoA synthetase subunit alpha; KEGG: npu:Npun_F5184 8.3e-132 CoA-binding domain-containing protein K01902.
 
 0.892
EKE99680.1
Putative type II citrate synthase; KEGG: ava:Ava_2713 1.2e-187 citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
  
 0.888
EKE96953.1
4Fe-4S binding domain protein; KEGG: cja:CJA_2255 2.4e-22 ferredoxin, 4Fe-4S.
 
 
 0.885
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.840
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.838
EKE97463.1
Protein HymB; KEGG: ava:Ava_4654 4.7e-232 respiratory-chain NADH dehydrogenase domain-containing protein K05587; Psort location: Cytoplasmic, score: 9.12.
  
 
 0.829
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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