STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF02419.1ChaB cation transport regulator; KEGG: pho:PH1322 0.47 alanine aminotransferase; K10907 aminotransferase. (67 aa)    
Predicted Functional Partners:
EKF02417.1
KEGG: pfd:PFDG_01096 0.015 hypothetical protein; K00889 1-phosphatidylinositol-4-phosphate 5-kinase.
       0.543
EKF04504.1
Putative lipoprotein; KEGG: aga:AgaP_AGAP003331 0.081 AGAP003331-PA; K09880 enolase-phosphatase E1.
  
     0.444
EKF02416.1
Hypothetical protein; KEGG: pma:Pro0760 0.98 umuD; family S24 peptidase; K03503 DNA polymerase V; Psort location: CytoplasmicMembrane, score: 9.86.
       0.415
EKF02418.1
KEGG: npu:Npun_R6557 3.6e-99 alpha/beta hydrolase fold protein; Psort location: Cytoplasmic, score: 8.96.
       0.415
EKF04503.1
Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
     0.410
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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