STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF02063.1KEGG: npu:Npun_R3490 3.3e-89 sugar transferase K00996; Psort location: CytoplasmicMembrane, score: 7.88. (233 aa)    
Predicted Functional Partners:
EKF04789.1
Exopolysaccharide biosynthesis protein; KEGG: cyn:Cyan7425_1087 1.0e-124 capsular exopolysaccharide family.
 
 
 0.926
EKF00465.1
KEGG: ava:Ava_1045 3.7e-145 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.921
EKF03585.1
KEGG: ava:Ava_4846 1.1e-221 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.917
EKE98880.1
Lipopolysaccharide biosynthesis protein; KEGG: cyn:Cyan7425_1127 1.8e-161 capsular exopolysaccharide family; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.917
EKF03055.1
Putative lipopolysaccharide biosynthesis protein; KEGG: ava:Ava_2661 3.9e-205 hypothetical protein K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.916
EKF00557.1
Chain length determinant protein; KEGG: ava:Ava_0852 2.9e-145 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.915
EKF04893.1
Putative protein-tyrosine kinase; KEGG: cyn:Cyan7425_2153 1.4e-129 capsular exopolysaccharide family.
 
 
 0.914
EKE98406.1
KEGG: ava:Ava_1116 1.4e-294 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.910
EKF01431.1
KEGG: ava:Ava_2908 4.7e-280 lipopolysaccharide biosynthesis K00903.
 
 
 0.900
EKF00330.1
KEGG: ava:Ava_1045 1.2e-48 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.892
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.