STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF02073.1SpoIID/LytB domain protein; KEGG: cts:Ctha_1380 0.98 ATP synthase F0, B subunit; K02109 F-type H+-transporting ATPase subunit b. (382 aa)    
Predicted Functional Partners:
EKF02007.1
N-acetylmuramoyl-L-alanine amidase; KEGG: npu:Npun_R2674 1.8e-136 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.587
EKF04101.1
Peptidase, M23 family; KEGG: npu:Npun_F6078 6.8e-224 peptidase M23B; Psort location: OuterMembrane, score: 8.86.
 
  
 0.573
EKF03708.1
KEGG: bcg:BCG9842_B4399 3.8e-33 csaB; polysaccharide pyruvyl transferase CsaB.
  
     0.551
EKF05016.1
KEGG: ana:alr0093 6.3e-237 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.493
EKF05018.1
N-acetylmuramoyl-L-alanine amidase; KEGG: ava:Ava_1465 1.9e-203 cell wall hydrolase/autolysin K01448.
 
 
 0.482
EKF03678.1
N-acetylmuramoyl-L-alanine amidase; KEGG: npu:Npun_R6032 6.4e-244 cell wall hydrolase/autolysin K01448.
 
 
 0.479
EKF02921.1
KEGG: bha:BH1295 1.8e-18 hypothetical protein; K01448 N-acetylmuramoyl-L-alanine amidase.
  
     0.454
EKE99322.1
Hypothetical protein; KEGG: bfo:BRAFLDRAFT_102880 6.8e-10 hypothetical protein; K11839 ubiquitin carboxyl-terminal hydrolase 8.
  
     0.420
EKE98733.1
Hypothetical protein; KEGG: bha:BH3665 2.9e-23 lytC; N-acetylmuramoyl-L-alanine amidase (major autolysin); K01448 N-acetylmuramoyl-L-alanine amidase.
  
     0.417
EKF05896.1
Peptidase, M23 family; KEGG: npu:Npun_F0058 1.3e-176 peptidase M23B; Psort location: Extracellular, score: 9.64.
 
   
 0.414
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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