STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01573.1Hypothetical protein; KEGG: reu:Reut_A3334 0.0073 beta-lactamase-like; K01069 hydroxyacylglutathione hydrolase. (199 aa)    
Predicted Functional Partners:
EKE98494.1
KEGG: sfu:Sfum_1398 1.5e-187 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K00359 NADH oxidase.
   
 0.960
EKF04701.1
KEGG: pmf:P9303_22891 2.5e-132 thiF; molybdopterin biosynthesis protein K03751; Psort location: Cytoplasmic, score: 9.97.
   
 0.873
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
   
 0.771
ybeY
TIGR00043 protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.762
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.751
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
   
   0.730
EKF05863.1
KEGG: csa:Csal_0923 7.5e-12 rhodanese-like protein; K02439 thiosulfate sulfurtransferase.
   
 0.659
EKF02911.1
Rhodanese-like domain protein; KEGG: bmj:BMULJ_00756 3.4e-16 sseA; thiosulfate sulfurtransferase.
   
 0.659
EKF02618.1
Rhodanese-like domain protein; KEGG: ftn:FTN_0120 2.9e-10 rhodanese-related sulfurtransferase; K01010 thiosulfate sulfurtransferase.
   
 0.659
EKF00523.1
Rhodanese protein; KEGG: azo:azo0849 2.2e-14 putative sulfurtransferase protein K01010.
   
 0.659
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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