STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01635.1KEGG: ava:Ava_4693 1.5e-109 glutathione S-transferase-like protein K00799; Psort location: Cytoplasmic, score: 8.96; Belongs to the GST superfamily. (280 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.934
rpoB
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.835
rpoZ
DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.816
rpoC1
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.807
rpoC2
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
   
   0.807
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.761
EKF02564.1
Glutaredoxin; KEGG: cyp:PCC8801_0474 1.0e-103 glutaredoxin-family domain protein.
   
 0.732
lysS
lysine--tRNA ligase; KEGG: npu:Npun_R5202 1.0e-252 lysyl-tRNA synthetase K04567; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.717
EKF01924.1
Hypothetical protein; KEGG: npu:Npun_R5202 2.5e-06 lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.717
EKF06039.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; KEGG: ana:all2810 1.2e-187 glutathione dependent formaldehyde dehydrogenase; K00001 alcohol dehydrogenase K00121; Psort location: Cytoplasmic, score: 9.97; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 0.715
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.