STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01516.1Hypothetical protein; KEGG: ent:Ent638_1614 0.032 DNA polymerase III subunit delta' K02341. (681 aa)    
Predicted Functional Partners:
EKF01517.1
Putative bacteriophage protein; KEGG: pde:Pden_2307 0.028 cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.955
EKF01515.1
Putative outer membrane protein; KEGG: chu:CHU_1027 1.1e-09 hypothetical protein K01238.
 
   
 0.920
EKF01514.1
Putative outer membrane protein; KEGG: avn:Avin_23620 0.66 ppiD; PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D.
 
   
 0.874
EKF04079.1
Putative cell division protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.832
EKF01502.1
Hypothetical protein; KEGG: cby:CLM_0574 0.63 bacteriocin biosynthesis cyclodehydratase, SagC family; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.827
EKF00301.1
HAMP domain protein; KEGG: ava:Ava_4696 0. GAF sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.820
EKF01504.1
Bacteriophage tail sheath protein; KEGG: lsp:Bsph_4341 0.58 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor.
 
   
 0.805
EKF01512.1
Hypothetical protein; KEGG: afl:Aflv_0886 0.46 nucleoside-diphosphate-sugar pyrophosphorylase fused to phosphomannomutase; K00966 mannose-1-phosphate guanylyltransferase K01840; Psort location: OuterMembrane, score: 9.49.
 
   
 0.803
EKF01505.1
Bacteriophage tail protein; KEGG: pmo:Pmob_0352 0.97 tryptophanyl-tRNA synthetase K01867.
  
   
 0.800
EKF01506.1
Bacteriophage tail protein; KEGG: lrf:LAR_0740 0.79 dihydrofolate reductase; K00287 dihydrofolate reductase; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.797
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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