STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01462.1Hypothetical protein; KEGG: ath:AT5G56680 0.97 SYNC1; SYNC1 (EMBRYO DEFECTIVE 2755); ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding / nucleotide binding; K01893 asparaginyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96. (267 aa)    
Predicted Functional Partners:
EKF01463.1
Hypothetical protein; KEGG: dre:558951 0.80 similar to G/T mismatch DNA glycosylase; K03649 TDG/mug DNA glycosylase family protein; Psort location: Cytoplasmic, score: 8.96.
       0.714
EKF00734.1
Hypothetical protein; KEGG: mbr:MONBRDRAFT_38997 0.25 hypothetical protein; K02127 F-type H+-transporting ATPase subunit b.
  
     0.705
EKF01384.1
Putative GTP-binding protein; KEGG: jan:Jann_0201 0.21 methyltransferase GidB; K03501 glucose inhibited division protein B.
  
     0.685
EKF05210.1
Hypothetical protein; KEGG: bfr:BF3816 0.81 uracil-DNA glycosylase; K03648 uracil-DNA glycosylase.
  
     0.636
EKF01464.1
Putative McrA/HNH; KEGG: scl:sce1711 4.1e-05 mcrA; HNH endonuclease family protein.
 
     0.632
EKF05377.1
Hypothetical protein; KEGG: bld:BLi03706 0.999 sacB; SacB; K00692 levansucrase.
  
     0.623
EKF01461.1
Acyltransferase domain protein; KEGG: rba:RB8928 2.9e-07 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.618
EKF05256.1
Hypothetical protein.
  
     0.574
EKF00233.1
Hypothetical protein; KEGG: pmj:P9211_02581 0.21 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435.
  
     0.540
EKE99823.1
Mo-dependent nitrogenase; KEGG: seh:SeHA_C2090 0.96 DNA polymerase III subunit theta K02345.
  
     0.531
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.