STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01400.1Phycoerythrocyanin-associated protein; KEGG: mgm:Mmc1_0129 0.998 type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (249 aa)    
Predicted Functional Partners:
EKF01398.1
Phycocerrythrocyanin-associated protein; KEGG: cyt:cce_0994 0.0055 petH; ferredoxin-NADP oxidoreductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family.
 
  
0.989
EKF01782.1
C-phycoerythrin beta subunit; KEGG: ach:Achl_0940 0.39 methylmalonate-semialdehyde dehydrogenase; K00140 methylmalonate-semialdehyde dehydrogenase.
 
 
 0.982
EKF01783.1
C-phycoerythrin alpha subunit; KEGG: npu:Npun_F2351 2.0e-06 glutathione S-transferase-like protein.
 
 
 0.982
EKF02362.1
Allophycocyanin-associated protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.966
EKF01401.1
Phycoerythrocyanin-associated protein; KEGG: cli:Clim_0029 0.34 F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
 
  
 
0.962
EKF03345.1
Phycocyanin beta subunit; KEGG: mpu:MYPU_2670 0.15 atpG; F0F1 ATP synthase subunit gamma K02115.
 
 
 0.961
EKF03346.1
Phycocyanin alpha subunit; KEGG: rpf:Rpic12D_1629 0.54 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455.
 
 
 0.961
EKF02371.1
Phycocyanin beta subunit; KEGG: xom:XOO_3079 0.55 trpA; tryptophan synthase subunit alpha K01695.
 
 
 0.961
EKF02372.1
Phycocyanin alpha subunit; KEGG: lpl:lp_0251 0.46 selA; L-seryl-tRNA(sec) selenium transferase (putative) K01042.
 
 
 0.961
EKF02378.1
Phycocyanin beta subunit; KEGG: sil:SPO0923 0.37 carB; carbamoyl phosphate synthase large subunit K01955.
 
 
 0.961
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.