STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01410.1KEGG: pop:POPTR_195584 0.53 hypothetical protein; K10685 ubiquitin-like 1-activating enzyme E1 B. (61 aa)    
Predicted Functional Partners:
EKF01408.1
Hypothetical protein; KEGG: msu:MS1589 0.63 DNA polymerase III subunit psi; K02344 DNA polymerase III subunit psi.
       0.551
EKF01409.1
Methyltransferase domain protein; KEGG: ots:OTBS_1641 6.6e-05 ubiG; ubiquinone biosynthesis O-methyltransferase K00568; Psort location: Cytoplasmic, score: 8.96.
       0.551
EKF01407.1
3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: pin:Ping_0372 0.098 fructose-bisphosphate aldolase K01624.
       0.439
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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